1UVZ Oxidoreductase date Jan 27, 2004
title Structure Of Human Thioredoxin 2
authors A.Smeets, C.Evrard, J.P.Declercq
compound source
Molecule: Thioredoxin
Chain: A, B, C, D, E, F
Fragment: Residues 60-166
Synonym: Human Thioredoxin 2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: M15 (Prep4)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
Other_details: Synthetic Gene
symmetry Space Group: P 1
R_factor 0.200 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.038 49.087 78.977 87.96 83.19 79.08
method X-Ray Diffractionresolution 2.01 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceCrystal structures of oxidized and reduced forms of human mitochondrial thioredoxin 2., Smeets A, Evrard C, Landtmeters M, Marchand C, Knoops B, Declercq JP, Protein Sci. 2005 Oct;14(10):2610-21. PMID:16195549
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk]
  • Biological Unit Coordinates (1uvz.pdb1.gz) 39 Kb
  • Biological Unit Coordinates (1uvz.pdb2.gz) 37 Kb
  • Biological Unit Coordinates (1uvz.pdb3.gz) 38 Kb
  • CSU: Contacts of Structural Units for 1UVZ
  • Likely Quarternary Molecular Structure file(s) for 1UVZ
  • Structure Factors (623 Kb)
  • Retrieve 1UVZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UVZ from S2C, [Save to disk]
  • Re-refined 1uvz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UVZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UVZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UVZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uvz_E] [1uvz_B] [1uvz_A] [1uvz] [1uvz_F] [1uvz_C] [1uvz_D]
  • SWISS-PROT database: [Q99757]
  • Domain organization of [THIOM_HUMAN] by SWISSPFAM
  • Other resources with information on 1UVZ
  • Community annotation for 1UVZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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