1UW7 Viral Protein date Jan 30, 2004
title Nsp9 Protein From Sars-Coronavirus.
authors G.Sutton, E.Fry, L.Carter, S.Sainsbury, T.Walter, J.Nettleship, N. R.Owens, R.Gilbert, A.Davidson, S.Siddell, L.L.M.Poon, J.Diprose D.Alderton, M.Walsh, J.M.Grimes, D.I.Stuart
compound source
Molecule: Nsp9
Chain: A
Fragment: Nsp9, Residues 3925-4037
Synonym: Pp1ab, Orf1ab, Replicase Polyprotein 1ab
Engineered: Yes
Organism_scientific: Sars Coronavirus Hku-39849
Organism_taxid: 228404
Cell_line: Vero E6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)
Expression_system_vector: Pdest17
Expression_system_plasmid: Gateway
symmetry Space Group: P 43 2 2
R_factor 0.228 R_Free 0.314
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.000 58.000 85.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
related structures by homologous chain: 1QZ8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe nsp9 replicase protein of SARS-coronavirus, structure and functional insights., Sutton G, Fry E, Carter L, Sainsbury S, Walter T, Nettleship J, Berrow N, Owens R, Gilbert R, Davidson A, Siddell S, Poon LL, Diprose J, Alderton D, Walsh M, Grimes JM, Stuart DI, Structure (Camb) 2004 Feb;12(2):341-53. PMID:14962394
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1uw7.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 1UW7
  • Likely Quarternary Molecular Structure file(s) for 1UW7
  • Structure Factors (28 Kb)
  • Retrieve 1UW7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UW7 from S2C, [Save to disk]
  • Re-refined 1uw7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UW7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UW7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UW7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uw7a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1uw7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uw7] [1uw7_A]
  • SWISS-PROT database: [P0C6X7] [P0C6U8]
  • Domain organization of [R1AB_CVHSA] [R1A_CVHSA] by SWISSPFAM
  • Other resources with information on 1UW7
  • Community annotation for 1UW7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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