1UZK Glycoprotein date Mar 13, 2004
title Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human Fibri Bound To Cbegf23 Domain Only
authors S.S.J.Lee, V.Knott, K.Harlos, P.A.Handford, D.I.Stuart
compound source
Molecule: Fibrillin-1
Chain: A
Fragment: Begf22-Tb4-Cbegf23, Residues 1486-1647
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Extra-Cellular Matrix
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Nm554
symmetry Space Group: I 2 2 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.500 70.800 102.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.35 Å
ligand CA, MSE enzyme
note 1UZK is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the integrin binding fragment from fibrillin-1 gives new insights into microfibril organization., Lee SS, Knott V, Jovanovic J, Harlos K, Grimes JM, Choulier L, Mardon HJ, Stuart DI, Handford PA, Structure. 2004 Apr;12(4):717-29. PMID:15062093
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1uzk.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1UZK
  • CSU: Contacts of Structural Units for 1UZK
  • Likely Quarternary Molecular Structure file(s) for 1UZK
  • Retrieve 1UZK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UZK from S2C, [Save to disk]
  • View 1UZK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UZK
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UZK, from MSDmotif at EBI
  • Fold representative 1uzk from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uzk] [1uzk_A]
  • SWISS-PROT database: [P35555]
  • Domain organization of [FBN1_HUMAN] by SWISSPFAM
  • Domain found in 1UZK: [EGF_CA ] by SMART
  • Other resources with information on 1UZK
  • Community annotation for 1UZK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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