1V0B Crystal structure of the t198a mutant of pfpk5 date
authors Holton, S., Merckx, A., Burgess, D., Doerig, C., Noble, M., Endicott, J.
compound source
symmetry
R_factor
R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
related structures by homologous chain: 1QMZ
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • cyclin-dependent protein ser...


    • Primary referenceStructures of P. falciparum PfPK5 test the CDK regulation paradigm and suggest mechanisms of small molecule inhibition., Holton S, Merckx A, Burgess D, Doerig C, Noble M, Endicott J, Structure (Camb) 2003 Nov;11(11):1329-37. PMID:14604523
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (1v0b.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (1v0b.pdb2.gz) 47 Kb
  • CSU: Contacts of Structural Units for 1V0B
  • Likely Quarternary Molecular Structure file(s) for 1V0B
  • Structure Factors (483 Kb)
  • Retrieve 1V0B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V0B from S2C, [Save to disk]
  • Re-refined 1v0b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1V0B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1V0B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1V0B, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1v0ba_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1v0bb_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v0b] [1v0b_B] [1v0b_A]
  • SWISS-PROT database: [Q07785]
  • Domain organization of [CDC2H_PLAFK] by SWISSPFAM
  • Domain found in 1V0B: [S_TKc ] by SMART
    • Other resources with information on 1V0B
  • Community annotation for 1V0B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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