1V0X Oxidoreductase date Apr 02, 2004
title Theoretical Model Structure Of Human Cyclooxgenase-2
authors S.Mahanta, P.K.Sarma, A.K.Buragohain
compound source
Molecule: Prostaglandin Gh Synthase 2
Chain: A
Synonym: Cyclooxygenase-2, Cox-2, Pgh Synthase 2, Prostaglandin-Endoperoxide Synthase 2, Pghs-2, Phs II, Prostaglandin H2 Synthase 2;
Ec: 1.14.99.1
Organism_scientific: Homo Sapiens
Organism_common: Human
methodTheoretical Model
ligand
enzyme Oxidoreductase E.C.1.14.99.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1V0X
  • View 1V0X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1V0X
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 1v0x from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • SWISS-PROT database: [P35354]
  • Domain organization of [PGH2_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 1V0X with the sequences similar proteins can be viewed for 1V0X's classification [PGH2_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [PGH2_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1V0X
  • Community annotation for 1V0X at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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