authors Tahirov, T.H., Inagaki, E.
compound source
R_Free 0.1984
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand DIO enzyme
related structures by homologous chain: 1V1A, 1V1B
A, B
  • 2-dehydro-3-deoxygluconokina...

  • Primary referenceStructure of Thermus thermophilus 2-Keto-3-deoxygluconate kinase: evidence for recognition of an open chain substrate., Ohshima N, Inagaki E, Yasuike K, Takio K, Tahirov TH, J Mol Biol. 2004 Jul 9;340(3):477-89. PMID:15210349
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (1v19.pdb1.gz) 283 Kb
  • LPC: Ligand-Protein Contacts for 1V19
  • CSU: Contacts of Structural Units for 1V19
  • Likely Quarternary Molecular Structure file(s) for 1V19
  • Structure Factors (296 Kb)
  • Retrieve 1V19 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V19 from S2C, [Save to disk]
  • Re-refined 1v19 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1V19 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1V19
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1V19, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1v19a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1v19b_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v19_A] [1v19] [1v19_B]
  • SWISS-PROT database: [Q53W83]
  • Domain organization of [Q53W83_THET8] by SWISSPFAM
  • Other resources with information on 1V19
  • Community annotation for 1V19 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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