1VED	Hydrolase	date	Mar 30, 2004
title	The Crystal Structure Of The Orthorhombic Form Of Hen Egg Wh Lysozyme At 1.9 Angstroms Resolution In Space
authors	S.Aibara, A.Suzuki, A.Kidera, K.Shibata, T.Yamane, L.J.Delucas, M.
compound		source
Molecule: Lysozyme C Chain: A Synonym: 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D 4, G Ec: 3.2.1.17		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Tissue: Egg White
symmetry	Space Group: P 21 21 21	R_factor 0.174 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.210 68.200 30.360 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand		enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1IR7, 6LYT
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (1ved.pdb1.gz) 22 Kb CSU: Contacts of Structural Units for 1VED Likely Quarternary Molecular Structure file(s) for 1VED Structure Factors (67 Kb) Retrieve 1VED in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VED from S2C, [Save to disk] Re-refined 1ved structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VED in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1VED

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1VED, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1veda_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ved] [1ved_A] SWISS-PROT database: [P00698] Domain organization of [LYSC_CHICK] by SWISSPFAM Domain found in 1VED: [LYZ1 ] by SMART

Other resources with information on 1VED

Community annotation for 1VED at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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