1VFQ Protein Binding date Apr 19, 2004
title The Crystal Structure Of Human Coactosin-Like Protein At 1.9 A Resolution
authors X.Li, Y.Liu, X.Liu, Z.Lou
compound source
Molecule: Coactosin-Like Protein
Chain: A
Synonym: Clp
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1
symmetry Space Group: P 1 21 1
R_factor 0.166 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
25.610 55.158 37.426 90.00 95.96 90.00
method X-Ray Diffractionresolution 1.90 Å
related structures by homologous chain: 1T2L
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of human coactosin-like protein at 1.9 A resolution., Li X, Liu X, Lou Z, Duan X, Wu H, Liu Y, Rao Z, Protein Sci 2004 Nov;13(11):2845-51. Epub 2004 Sep 30. PMID:15459340
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (1vfq.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1VFQ
  • Likely Quarternary Molecular Structure file(s) for 1VFQ
  • Structure Factors (113 Kb)
  • Retrieve 1VFQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VFQ from S2C, [Save to disk]
  • Re-refined 1vfq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1VFQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1VFQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1VFQ, from MSDmotif at EBI
  • Fold representative 1vfq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vfq] [1vfq_A]
  • SWISS-PROT database: [Q14019]
  • Domain organization of [COTL1_HUMAN] by SWISSPFAM
  • Domain found in 1VFQ: [ADF ] by SMART
  • Other resources with information on 1VFQ
  • Community annotation for 1VFQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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