1VPZ	Crystal structure of a putative carbon storage regulator protein (csra, pa0905) from pseudomonas aeruginosa at 2.05 A resolution	date
authors	JCSG, Joint.Center.for.Structural.Genomics.
compound		source
symmetry		R_factor R_Free 0.27545
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.05
ligand	MSE	enzyme
related structures	by homologous chain: 1Y00
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of the global regulatory protein CsrA from Pseudomonas putida at 2.05 A resolution reveals a new fold., Rife C, Schwarzenbacher R, McMullan D, Abdubek P, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Sims E, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Wilson IA, Proteins. 2005 Nov 1;61(2):449-53. PMID:16104018

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk] Biological Unit Coordinates (1vpz.pdb1.gz) 19 Kb LPC: Ligand-Protein Contacts for 1VPZ CSU: Contacts of Structural Units for 1VPZ Likely Quarternary Molecular Structure file(s) for 1VPZ Structure Factors (882 Kb) Retrieve 1VPZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VPZ from S2C, [Save to disk] Re-refined 1vpz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VPZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1VPZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1VPZ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1vpza_, region A [Jmol] [rasmolscript] [script source]     - Domain d1vpzb_, region B [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vpz_A] [1vpz] [1vpz_B] SWISS-PROT database: [O69078] Domain organization of [CSRA_PSEAE] by SWISSPFAM

Other resources with information on 1VPZ

Community annotation for 1VPZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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