1W0S Glycoprotein date Jun 11, 2004
title Solution Structure Of Trimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation
authors Z.Sun, K.B.M.Reid, S.J.Perkins
compound source
Molecule: Properdin
Chain: A, B, C
Fragment: Residues 28-469
Synonym: Factor P
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Solution Scatteringresolution
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThe dimeric and trimeric solution structures of the multidomain complement protein properdin by X-ray scattering, analytical ultracentrifugation and constrained modelling., Sun Z, Reid KB, Perkins SJ, J Mol Biol. 2004 Nov 5;343(5):1327-43. PMID:15491616
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (1w0s.pdb1.gz) 10 Kb
  • Biological Unit Coordinates (1w0s.pdb2.gz) 10 Kb
  • Biological Unit Coordinates (1w0s.pdb3.gz) 9 Kb
  • CSU: Contacts of Structural Units for 1W0S
  • Likely Quarternary Molecular Structure file(s) for 1W0S
  • Retrieve 1W0S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W0S from S2C, [Save to disk]
    • View 1W0S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1W0S
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W0S, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w0s_A] [1w0s] [1w0s_B] [1w0s_C]
  • SWISS-PROT database: [P27918]
  • Domain organization of [PROP_HUMAN] by SWISSPFAM
  • Domain found in 1W0S: [TSP1 ] by SMART
    • Other resources with information on 1W0S
  • Community annotation for 1W0S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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