1W0V Immune System date Jun 14, 2004
title Crystal Structure Of Hla-B2705 Complexed With The Self-Peptide Tis From Egf-Response Factor 1
authors M.Hulsmeyer, M.T.Fiorillo, F.Bettosini, R.Sorrentino, W.Saenger, A.Ziegler, B.Uchanska-Ziegler
compound source
Molecule: Hla Class I Histocompatibility Antigen
Chain: A
Fragment: Extracellular Domain, Residues 25-300
Synonym: B27 Alpha Chain Precursor, Mhc Class I Antigen B2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Beta-2-Microglobulin
Chain: B
Fragment: Residues 21-119
Synonym: Hdcma22p
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Butyrate Response Factor 2
Chain: C
Fragment: Residues 479-487
Synonym: Egf-Response Factor 2, Erf-2, Tis11d Protein

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.184 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.861 82.488 109.421 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.27 Å
ligand GOL enzyme
related structures by homologous chain: 1A1O, 1EEY, 1GZQ
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

  • Primary referenceThermodynamic and structural equivalence of two HLA-B27 subtypes complexed with a self-peptide., Hulsmeyer M, Welfle K, Pohlmann T, Misselwitz R, Alexiev U, Welfle H, Saenger W, Uchanska-Ziegler B, Ziegler A, J Mol Biol. 2005 Mar 11;346(5):1367-79. Epub 2005 Jan 28. PMID:15713487
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1w0v.pdb1.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 1W0V
  • CSU: Contacts of Structural Units for 1W0V
  • Likely Quarternary Molecular Structure file(s) for 1W0V
  • Structure Factors (202 Kb)
  • Retrieve 1W0V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W0V from S2C, [Save to disk]
  • Re-refined 1w0v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W0V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W0V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1W0V, from MSDmotif at EBI
  • Fold representative 1w0v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w0v] [1w0v_A] [1w0v_B] [1w0v_C]
  • SWISS-PROT database: [P03989] [P61769] [Q07352]
  • Domain organization of [1B27_HUMAN] [B2MG_HUMAN] [TISB_HUMAN] by SWISSPFAM
  • Domain found in 1W0V: [IGc1 ] by SMART
  • Other resources with information on 1W0V
  • Community annotation for 1W0V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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