1W0X Transferase date Jun 14, 2004
title Crystal Structure Of Human Cdk2 In Complex With The Inhibitor Olomoucine.
authors U.Schulze-Gahmen, L.Meijer, S.H.Kim
compound source
Molecule: Cyclin-Dependent Kinase 2
Chain: C
Synonym: P33 Protein Kinase, Cdk2
Ec: 2.7.1.37
Engineered: Yes
Other_details: Inhibitor Bound In Pocket Between 2 Domains
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.19 R_Free 0.27
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.770 72.550 54.060 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand OLO BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
related structures by homologous chain: 1DI8, 1QMZ
Gene
Ontology
ChainFunctionProcessComponent
C


Primary referenceMultiple modes of ligand recognition: crystal structures of cyclin-dependent protein kinase 2 in complex with ATP and two inhibitors, olomoucine and isopentenyladenine., Schulze-Gahmen U, Brandsen J, Jones HD, Morgan DO, Meijer L, Vesely J, Kim SH, Proteins. 1995 Aug;22(4):378-91. PMID:7479711
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1w0x.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 1W0X
  • CSU: Contacts of Structural Units for 1W0X
  • Likely Quarternary Molecular Structure file(s) for 1W0X
  • Structure Factors (104 Kb)
  • Retrieve 1W0X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W0X from S2C, [Save to disk]
  • Re-refined 1w0x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W0X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W0X
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1W0X, from MSDmotif at EBI
  • Fold representative 1w0x from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w0x] [1w0x_C]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 1W0X: [S_TKc ] by SMART
  • Other resources with information on 1W0X
  • Community annotation for 1W0X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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