1W3Z Complement Regulator date Jul 21, 2004
title Semet Derivative Of Bbcrasp-1 From Borrelia Burgdorferi
authors F.S.Cordes, P.Roversi, L.Goodstadt, C.Ponting, P.Kraiczy, C.Skerka, M.Kirschfink, M.M.Simon, V.Brade, P.Zipfel, R.Wallich, S.M.Lea
compound source
Molecule: Bbcrasp-1
Chain: A, B
Fragment: Extracellular Domain, Residues 70-250
Engineered: Yes
Other_details: Factor H Binding Dimer Selenomethionine Derivative
Organism_scientific: Borrelia Burgdorferi
Organism_common: Lyme Disease Spirochete
Organism_taxid: 445985
Strain: Zs7
Variant: Tick Isolate
Atcc: 35210
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)
Expression_system_plasmid: Pgex-2t
Other_details: Tick Isolate Germany
symmetry Space Group: P 43 21 2
R_factor 0.239 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.558 91.558 146.517 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.2 Å
ligand MSE enzyme
Primary referenceA novel fold for the factor H-binding protein BbCRASP-1 of Borrelia burgdorferi., Cordes FS, Roversi P, Kraiczy P, Simon MM, Brade V, Jahraus O, Wallis R, Skerka C, Zipfel PF, Wallich R, Lea SM, Nat Struct Mol Biol. 2005 Mar;12(3):276-7. Epub 2005 Feb 13. PMID:15711564
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (1w3z.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 1W3Z
  • CSU: Contacts of Structural Units for 1W3Z
  • Likely Quarternary Molecular Structure file(s) for 1W3Z
  • Structure Factors (141 Kb)
  • Retrieve 1W3Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W3Z from S2C, [Save to disk]
  • Re-refined 1w3z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W3Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W3Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W3Z, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w3z] [1w3z_A] [1w3z_B]
  • SWISS-PROT database: [O50957]
  • Domain organization of [O50957_BORBU] by SWISSPFAM
  • Other resources with information on 1W3Z
  • Community annotation for 1W3Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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