1W82	Kinase Inhibitor	date	Sep 16, 2004
title	P38 Kinase Crystal Structure In Complex With Small Molecule
authors	J.Tickle, H.Jhoti, A.Cleasby, L.Devine
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: P38 Map Kinase Ec: 2.7.1.37 Engineered: Yes Other_details: Kinase Domain		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008
symmetry	Space Group: P 21 21 21	R_factor 0.171 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.684 85.369 126.000 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	L10 BindingDB	enzyme	Transferase E.C.2.7.1.37 BRENDA
related structures	by homologous chain: 1W84, 1WBO
Gene Ontology	Chain Function Process Component A
Primary reference	Identification of novel p38alpha MAP kinase inhibitors using fragment-based lead generation., Gill AL, Frederickson M, Cleasby A, Woodhead SJ, Carr MG, Woodhead AJ, Walker MT, Congreve MS, Devine LA, Tisi D, O'Reilly M, Seavers LC, Davis DJ, Curry J, Anthony R, Padova A, Murray CW, Carr RA, Jhoti H, J Med Chem. 2005 Jan 27;48(2):414-26. PMID:15658855

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk] Biological Unit Coordinates (1w82.pdb1.gz) 68 Kb LPC: Ligand-Protein Contacts for 1W82 CSU: Contacts of Structural Units for 1W82 Likely Quarternary Molecular Structure file(s) for 1W82 Retrieve 1W82 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1W82 from S2C, [Save to disk]

View 1W82 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1W82

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1W82, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1w82_A] [1w82] SWISS-PROT database: [Q16539] Domain organization of [MK14_HUMAN] by SWISSPFAM Domain found in 1W82: [S_TKc ] by SMART

Other resources with information on 1W82

Community annotation for 1W82 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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