1W9I Myosin date Oct 13, 2004
title Myosin II Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx
authors C.A.Morris, P.D.Coureux, A.L.Wells, A.Houdusse, H.L.Sweeney
compound source
Molecule: Myosin II Heavy Chain
Chain: A
Fragment: Motor Domain, Residues 1-754
Synonym: Non Muscle, Myosin II Dictyostelium Discoideum
Ec: 3.6.4.1
Engineered: Yes
Mutation: Yes
Other_details: Mgadp-Befx
Organism_scientific: Dictyostelium Discoideum
Organism_taxid: 44689
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 2
R_factor 0.182 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.017 186.506 54.713 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand ADP, BEF, EDO, MG enzyme Hydrolase E.C.3.6.4.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (1w9i.pdb1.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 1W9I
  • CSU: Contacts of Structural Units for 1W9I
  • Likely Quarternary Molecular Structure file(s) for 1W9I
  • Structure Factors (796 Kb)
  • Retrieve 1W9I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W9I from S2C, [Save to disk]
  • Re-refined 1w9i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W9I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W9I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W9I, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w9i] [1w9i_A]
  • SWISS-PROT database: [P08799]
  • Domain organization of [MYS2_DICDI] by SWISSPFAM
  • Domain found in 1W9I: [MYSc ] by SMART
  • Other resources with information on 1W9I
  • Community annotation for 1W9I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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