1WE6 Gene Regulation date May 24, 2004
title Solution Structure Of Ubiquitin-Like Domain In Splicing Fact Aal91182
authors F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama, Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Splicing Factor, Putative
Chain: A
Fragment: Ubiquitin-Like Domain
Synonym: Splicing Factor Aal91182
Engineered: Yes
 Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale Cress
Organism_taxid: 3702
Gene: Rafl06-12-F22
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P030212-82
Other_details: Cell Free Protein Synthesis
methodSolution NMR
note 1WE6 is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (548 Kb) [Save to disk]
  • Biological Unit Coordinates (1we6.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1WE6
  • Original NMR restraints for 1WE6 from PDB
  • Retrieve 1WE6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WE6 from S2C, [Save to disk]
    • View 1WE6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WE6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WE6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1we6a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1we6_A] [1we6]
  • SWISS-PROT database: [Q8RXF1]
  • Domain organization of [SF3A1_ARATH] by SWISSPFAM
  • Domain found in 1WE6: [UBQ ] by SMART
    • Other resources with information on 1WE6
  • Community annotation for 1WE6 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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