1WH7 Dna Binding Protein date May 28, 2004
title Solution Structure Of Homeobox Domain Of Arabidopsis Thalian Hypothetical Protein F22k18.140
authors D.Kaneno, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Rike Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Zf-Hd Homeobox Family Protein
Chain: A
Fragment: Homeobox Domain
Synonym: Hypothetical Protein F22k18.140, At4g24660f22k18_ Finger Homeobox Family Protein;
Engineered: Yes
 Organism_scientific: Arabidopsis Thaliana
Organism_common: Thale Cress
Organism_taxid: 3702
Gene: Riken Cdna Rafl09-85-E18
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P030107-41
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
related structures by homologous chain: 1WH5
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (412 Kb) [Save to disk]
  • Biological Unit Coordinates (1wh7.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1WH7
  • Retrieve 1WH7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WH7 from S2C, [Save to disk]
    • View 1WH7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WH7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WH7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1wh7a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wh7] [1wh7_A]
  • SWISS-PROT database: [Q9SB61]
  • Domain organization of [Y4466_ARATH] by SWISSPFAM
    • Other resources with information on 1WH7
  • Community annotation for 1WH7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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