1WIO Glycoprotein date Dec 18, 1996
title Structure Of T-Cell Surface Glycoprotein Cd4, Tetragonal Cry
authors H.Wu, P.D.Kwong, W.A.Hendrickson
compound source
Molecule: T-Cell Surface Glycoprotein Cd4
Chain: A, B
Fragment: Extracellular Fragment
Synonym: Cd4
Other_details: Tetragonal Crystal Form
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 43 2 2
R_factor 0.240 R_Free 0.351
crystal
cell
length a length b length c angle alpha angle beta angle gamma
127.100 127.100 221.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.90 Å
note 1WIO (Molecule of the Month:pdb63)
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDimeric association and segmental variability in the structure of human CD4., Wu H, Kwong PD, Hendrickson WA, Nature 1997 May 29;387(6632):527-30. PMID:9168119
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (1wio.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (1wio.pdb2.gz) 50 Kb
  • CSU: Contacts of Structural Units for 1WIO
  • Likely Quarternary Molecular Structure file(s) for 1WIO
  • Retrieve 1WIO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WIO from S2C, [Save to disk]
    • View 1WIO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WIO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WIO, from MSDmotif at EBI
  • Genome occurence of 1WIO's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1wioa1, region A:1-97 [Jmol] [rasmolscript] [script source]
        - Domain d1wioa2, region A:179-291 [Jmol] [rasmolscript] [script source]
        - Domain d1wioa4, region A:292-363 [Jmol] [rasmolscript] [script source]
        - Domain d1wioa3, region A:98-178 [Jmol] [rasmolscript] [script source]
        - Domain d1wiob1, region B:1-97 [Jmol] [rasmolscript] [script source]
        - Domain d1wiob2, region B:179-291 [Jmol] [rasmolscript] [script source]
        - Domain d1wiob4, region B:292-363 [Jmol] [rasmolscript] [script source]
        - Domain d1wiob3, region B:98-178 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wio_B] [1wio_A] [1wio]
  • SWISS-PROT database: [P01730]
  • Domain organization of [CD4_HUMAN] by SWISSPFAM
  • Domains found in 1WIO: [IG_like] [IGv ] by SMART
    • Other resources with information on 1WIO
  • Community annotation for 1WIO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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