1WJL Protein Binding date May 29, 2004
title Solution Structure Of Pdz Domain Of Mouse Cypher Protein
authors M.Sato, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Cypher Protein
Chain: A
Fragment: Pdz Domain
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Riken Cdna 1110032b18
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P031104-22
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
related structures by homologous chain: 1WF7
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (441 Kb) [Save to disk]
  • Biological Unit Coordinates (1wjl.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 1WJL
  • Original NMR restraints for 1WJL from PDB
  • Retrieve 1WJL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WJL from S2C, [Save to disk]
    • View 1WJL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WJL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WJL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1wjla_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wjl_A] [1wjl]
  • SWISS-PROT database: [Q9JKS4]
  • Domain organization of [LDB3_MOUSE] by SWISSPFAM
  • Domain found in 1WJL: [PDZ ] by SMART
    • Other resources with information on 1WJL
  • Community annotation for 1WJL at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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