1WLP Oxidoreductase Signaling Protein date Jun 29, 2004
title Solution Structure Of The P22phox-P47phox Complex
authors K.Ogura, S.Torikai, K.Saikawa, S.Yuzawa, H.Sumimoto, F.Inagaki
compound source
Molecule: Cytochrome B-245 Light Chain
Chain: A
Fragment: Alpha Polypeptide (1-25)
Synonym: Flavocytochrome B558, P22phox
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1

Molecule: Neutrophil Cytosol Factor 1
Chain: B
Fragment: Tandem Sh3 Domain
Synonym: P47phox
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t-1
methodSolution NMR
note 1WLP is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceNMR solution structure of the tandem Src homology 3 domains of p47phox complexed with a p22phox-derived proline-rich peptide., Ogura K, Nobuhisa I, Yuzawa S, Takeya R, Torikai S, Saikawa K, Sumimoto H, Inagaki F, J Biol Chem. 2006 Feb 10;281(6):3660-8. Epub 2005 Dec 2. PMID:16326715
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1WLP
  • Original NMR restraints for 1WLP from PDB
  • Retrieve 1WLP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WLP from S2C, [Save to disk]
  • View 1WLP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WLP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1WLP, from MSDmotif at EBI
  • Fold representative 1wlp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wlp_A] [1wlp] [1wlp_B]
  • SWISS-PROT database: [P13498] [P14598]
  • Belongs to the phagocyte (gp91(phox)) nadph oxidase family according to TCDB.
  • Domain organization of [CY24A_HUMAN] [NCF1_HUMAN] by SWISSPFAM
  • Domain found in 1WLP: [SH3 ] by SMART
  • Alignments of the sequence of 1WLP with the sequences similar proteins can be viewed for 1WLP's classification [CY24A_HUMAN] [NCF1_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [CY24A_HUMAN] [NCF1_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1WLP
  • Community annotation for 1WLP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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