1WLZ Unknown Function date Jul 01, 2004
title Crystal Structure Of Djbp Fragment Which Was Obtained By Lim Proteolysis
authors K.Honbou, N.Suzuki, M.Horiuchi, T.Taira, T.Niki, H.Ariga, F.Inagak
compound source
Molecule: Cap-Binding Protein Complex Interacting Protein 1 A;
Chain: A, B, C, D
Fragment: Residues 229-329
Synonym: Djbp
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-6p-1
symmetry Space Group: P 1 21 1
R_factor 0.200 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.671 68.519 69.208 90.00 102.19 90.00
method X-Ray Diffractionresolution 1.60 Å
note 1WLZ is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (1wlz.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (1wlz.pdb2.gz) 16 Kb
  • Biological Unit Coordinates (1wlz.pdb3.gz) 16 Kb
  • Biological Unit Coordinates (1wlz.pdb4.gz) 16 Kb
  • CSU: Contacts of Structural Units for 1WLZ
  • Likely Quarternary Molecular Structure file(s) for 1WLZ
  • Structure Factors (406 Kb)
  • Retrieve 1WLZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WLZ from S2C, [Save to disk]
  • Re-refined 1wlz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1WLZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WLZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WLZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wlz_D] [1wlz_B] [1wlz] [1wlz_A] [1wlz_C]
  • SWISS-PROT database: [Q5THR3]
  • Domain organization of [EFCB6_HUMAN] by SWISSPFAM
  • Other resources with information on 1WLZ
  • Community annotation for 1WLZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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