1WMK	Transferase	date	Jul 11, 2004
title	Human Death-Associated Kinase Drp-1, Mutant S308d D40
authors	P.Kursula, G.Shani, A.Kimchi, M.Wilmanns
compound		source
Molecule: Death-Associated Protein Kinase 2 Chain: A, E, C, B, F, D, H, G Fragment: Residues 1-320 Synonym: Dap Kinase 2, Dap- Kinase Related Protein 1, Drp-1 Ec: 2.7.1.37 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta(De3)Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest-15
symmetry	Space Group: P 21 21 21	R_factor 0.276 R_Free 0.296
crystal cell	length a length b length c angle alpha angle beta angle gamma 86.190 143.290 255.720 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.60 Å
ligand		enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (384 Kb) [Save to disk] Biological Unit Coordinates (1wmk.pdb1.gz) 50 Kb Biological Unit Coordinates (1wmk.pdb2.gz) 51 Kb Biological Unit Coordinates (1wmk.pdb3.gz) 51 Kb Biological Unit Coordinates (1wmk.pdb4.gz) 51 Kb Biological Unit Coordinates (1wmk.pdb5.gz) 50 Kb Biological Unit Coordinates (1wmk.pdb6.gz) 51 Kb Biological Unit Coordinates (1wmk.pdb7.gz) 51 Kb Biological Unit Coordinates (1wmk.pdb8.gz) 50 Kb CSU: Contacts of Structural Units for 1WMK Likely Quarternary Molecular Structure file(s) for 1WMK Structure Factors (310 Kb) Retrieve 1WMK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WMK from S2C, [Save to disk] Re-refined 1wmk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WMK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WMK

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WMK, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wmk_C] [1wmk_E] [1wmk] [1wmk_D] [1wmk_H] [1wmk_B] [1wmk_A] [1wmk_G] [1wmk_F] SWISS-PROT database: [Q9UIK4] Domain organization of [DAPK2_HUMAN] by SWISSPFAM Domain found in 1WMK: [S_TKc ] by SMART

Other resources with information on 1WMK

Community annotation for 1WMK at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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