1WOO	Transferase	date	Aug 24, 2004
title	Crystal Structure Of T-Protein Of The Glycine Cleavage Syste
authors	H.H.Lee, D.J.Kim, H.J.Ahn, J.Y.Ha, S.W.Suh
compound		source
Molecule: Aminomethyltransferase Chain: A Synonym: Glycine Cleavage System T Protein Ec: 2.1.2.10 Engineered: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 2336 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21a
symmetry	Space Group: P 21 21 21	R_factor 0.218 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 52.499 53.942 149.400 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	THG	enzyme	Transferase E.C.2.1.2.10 BRENDA
related structures	by homologous chain: 1WOP
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of T-protein of the glycine cleavage system. Cofactor binding, insights into H-protein recognition, and molecular basis for understanding nonketotic hyperglycinemia., Lee HH, Kim do J, Ahn HJ, Ha JY, Suh SW, J Biol Chem 2004 Nov 26;279(48):50514-23. Epub 2004 Sep 07. PMID:15355973

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (1woo.pdb1.gz) 59 Kb LPC: Ligand-Protein Contacts for 1WOO CSU: Contacts of Structural Units for 1WOO Likely Quarternary Molecular Structure file(s) for 1WOO Structure Factors (132 Kb) Retrieve 1WOO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WOO from S2C, [Save to disk] Re-refined 1woo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WOO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WOO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WOO, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1wooa2, region A:1-278 [Jmol] [rasmolscript] [script source]     - Domain d1wooa1, region A:279-362 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1woo_A] [1woo] SWISS-PROT database: [Q9WY54] Domain organization of [GCST_THEMA] by SWISSPFAM

Other resources with information on 1WOO

Community annotation for 1WOO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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