1WQV	Hydrolase Hydrolase Inhibitor	date	Oct 02, 2004
title	Human Factor Viia-Tissue Factor Complexed With Propylsulfona Thr-Met-P-Aminobenzamidine
authors	S.Kadono, A.Sakamoto, Y.Kikuchi, M.Oh-Eda, N.Yabuta, T.Koga, K.Hat T.Shiraishi, M.Haramura, H.Kodama
compound		source
Molecule: Coagulation Factor Vii Chain: L Fragment: Factor Vii Light Chain Synonym: Serum Prothrombin Conversion Accelerator, Spca, Proconvertin, Eptacog Alfa; Ec: 3.4.21.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell: Cho
Molecule: Coagulation Factor Vii Chain: H Fragment: Factor Vii Heavy Chain Synonym: Serum Prothrombin Conversion Accelerator, Spca, Proconvertin, Eptacog Alfa; Ec: 3.4.21.21 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell: Cho
Molecule: Tissue Factor Chain: T Fragment: Residues 1-218 Synonym: Tf, Coagulation Factor III, Thromboplastin, Cd142 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm-109 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pkk223-3
symmetry	Space Group: P 21 21 21	R_factor 0.218 R_Free 0.272
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.390 82.420 123.510 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	BGC, CA, CGU, FUC, PSM	enzyme	Hydrolase E.C.3.4.21.21 BRENDA
Gene Ontology	Chain Function Process Component H L T
Primary reference	Crystal structure of human factor VIIa/tissue factor in complex with peptide mimetic inhibitor., Kadono S, Sakamoto A, Kikuchi Y, Oh-eda M, Yabuta N, Koga T, Hattori K, Shiraishi T, Haramura M, Kodama H, Esaki T, Sato H, Watanabe Y, Itoh S, Ohta M, Kozono T, Biochem Biophys Res Commun 2004 Nov 26;324(4):1227-33. PMID:15504346

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (1wqv.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 1WQV CSU: Contacts of Structural Units for 1WQV Likely Quarternary Molecular Structure file(s) for 1WQV Structure Factors (232 Kb) Retrieve 1WQV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WQV from S2C, [Save to disk] Re-refined 1wqv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WQV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WQV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WQV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wqv] [1wqv_H] [1wqv_T] [1wqv_L] SWISS-PROT database: [P08709] [P13726] Domain organization of [FA7_HUMAN] [TF_HUMAN] by SWISSPFAM Domains found in 1WQV: [EGF_CA] [EGF_like] [GLA] [Tryp_SPc ] by SMART

Other resources with information on 1WQV

Community annotation for 1WQV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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