1WV9	Structural Genomics, Unknown Function	date	Dec 12, 2004
title	Crystal Structure Of Rhodanese Homolog Tt1651 From An Extremely Thermophilic Bacterium Thermus Thermophilus Hb8
authors	E.Mizohata, M.Hattori, A.Tatsuguchi, T.Terada, S.Kuramitsu, M.Shirouzu, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Rhodanese Homolog Tt1651 Chain: A, B Synonym: Hypothetical Protein Ttha0613 Engineered: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 274 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a
symmetry	Space Group: P 31	R_factor 0.215 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.218 45.218 79.510 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	MSE	enzyme
note	1WV9 is a representative structure
Primary reference	Crystal structure of the single-domain rhodanese homologue TTHA0613 from Thermus thermophilus HB8., Hattori M, Mizohata E, Tatsuguchi A, Shibata R, Kishishita S, Murayama K, Terada T, Kuramitsu S, Shirouzu M, Yokoyama S, Proteins. 2006 Jul 1;64(1):284-7. PMID:16680676

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (1wv9.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 1WV9 CSU: Contacts of Structural Units for 1WV9 Likely Quarternary Molecular Structure file(s) for 1WV9 Structure Factors (192 Kb) Retrieve 1WV9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WV9 from S2C, [Save to disk] Re-refined 1wv9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WV9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WV9

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WV9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wv9_B] [1wv9_A] [1wv9] SWISS-PROT database: [Q5SKN0] Domain organization of [Q5SKN0_THET8] by SWISSPFAM Domain found in 1WV9: [RHOD ] by SMART

Other resources with information on 1WV9

Community annotation for 1WV9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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