1WXM Transferase date Jan 26, 2005
title Solution Structure Of The N-Terminal Ras-Binding Domain (Rbd A-Raf Kinase
authors C.Zhao, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: A-Raf Proto-Oncogene Serinethreonine-Protein Kin
Chain: A
Fragment: Ras-Binding Domain
Synonym: A-Raf Kinase, A- Raf-1, Proto-Oncogene Pks
Ec: 2.7.1.37
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Araf1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040712-12
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (431 Kb) [Save to disk]
  • Biological Unit Coordinates (1wxm.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1WXM
  • Retrieve 1WXM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WXM from S2C, [Save to disk]
    • View 1WXM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WXM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WXM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wxm_A] [1wxm]
  • SWISS-PROT database: [P10398]
  • Domain organization of [ARAF_HUMAN] by SWISSPFAM
  • Domain found in 1WXM: [RBD ] by SMART
    • Other resources with information on 1WXM
  • Community annotation for 1WXM at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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