1WYL Signaling Protein date Feb 15, 2005
title Solution Structure Of The Ch Domain Of Human Nedd9 Interacti With Calponin Homology And Lim Domains
authors T.Tomizawa, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama, Riken Struc Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Nedd9 Interacting Protein With Calponin Homology Domains;
Chain: A
Fragment: Ch Domain
Synonym: Molecule Interacting With Casl Protein 1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nical
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040315-92
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (552 Kb) [Save to disk]
  • Biological Unit Coordinates (1wyl.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1WYL
  • Original NMR restraints for 1WYL from PDB
  • Retrieve 1WYL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WYL from S2C, [Save to disk]
    • View 1WYL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WYL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WYL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wyl_A] [1wyl]
  • SWISS-PROT database: [Q8TDZ2]
  • Domain organization of [MICA1_HUMAN] by SWISSPFAM
  • Domain found in 1WYL: [CH ] by SMART
    • Other resources with information on 1WYL
  • Community annotation for 1WYL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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