1X0O Transcription date Mar 25, 2005
title Human Arnt C-Terminal Pas Domain
authors P.B.Card, P.J.Erbel, K.H.Gardner
compound source
Molecule: Aryl Hydrocarbon Receptor Nuclear Translocator
Chain: A
Fragment: C-Terminal Pas Domain
Synonym: Arnt Protein, Dioxin Receptor, Nuclear Translocator, Hypoxia-Inducible Factor 1 Beta, Hif-1 Beta
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
Primary referenceStructural Basis of ARNT PAS-B Dimerization: Use of a Common Beta-sheet Interface for Hetero- and Homodimerization., Card PB, Erbel PJ, Gardner KH, J Mol Biol 2005 Oct 28;353(3):664-77. Epub 2005 Sep 6. PMID:16181639
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (644 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1X0O
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1X0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X0O from S2C, [Save to disk]
  • View 1X0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X0O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X0O, from MSDmotif at EBI
  • Fold representative 1x0o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x0o_A] [1x0o]
  • SWISS-PROT database: [P27540]
  • Domain organization of [ARNT_HUMAN] by SWISSPFAM
  • Domains found in 1X0O: [PAC] [PAS ] by SMART
  • Other resources with information on 1X0O
  • Community annotation for 1X0O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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