1X1F Signaling Protein date Apr 04, 2005
title Solution Structure Of The Ph Domain Of Human Docking Protein
authors H.Li, T.Tomizawa, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Signal-Transducing Adaptor Protein 1
Chain: A
Fragment: Ph Domain
Synonym: Stap-1, Stem Cell Adaptor Protein 1, Bcr Downstrea Signaling Protein 1, Docking Protein Brdg1;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brdg1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040301-57
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (813 Kb) [Save to disk]
  • Biological Unit Coordinates (1x1f.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 1X1F
  • Retrieve 1X1F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X1F from S2C, [Save to disk]
    • View 1X1F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1X1F
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1X1F, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x1f_A] [1x1f]
  • SWISS-PROT database: [Q9ULZ2]
  • Domain organization of [STAP1_HUMAN] by SWISSPFAM
  • Domain found in 1X1F: [PH ] by SMART
    • Other resources with information on 1X1F
  • Community annotation for 1X1F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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