1X2K Signaling Protein date Apr 25, 2005
title Solution Structure Of The Sh3 Domain Of Human Osteoclast Sti Factor 1 (Ostf1)
authors Y.O.Kamatari, T.Tomizawa, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Osteoclast Stimulating Factor 1
Chain: A
Fragment: Sh3 Domain
Synonym: Ostf1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ostf1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040329-95
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (339 Kb) [Save to disk]
  • Biological Unit Coordinates (1x2k.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1X2K
  • Retrieve 1X2K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X2K from S2C, [Save to disk]
  • View 1X2K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X2K
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1X2K, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x2k] [1x2k_A]
  • SWISS-PROT database: [Q92882]
  • Domain organization of [OSTF1_HUMAN] by SWISSPFAM
  • Domain found in 1X2K: [SH3 ] by SMART
  • Other resources with information on 1X2K
  • Community annotation for 1X2K at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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