1X51 Hydrolase, Dna Binding Protein date May 15, 2005
title Solution Structure Of The Nudix Domain From Human Ag- Specific Adenine Dna Glycosylase Alpha-3 Splice Isoform
authors T.Tomizawa, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Ag-Specific Adenine Dna Glycosylase
Chain: A
Fragment: Nudix Domain
Synonym: Ag-Specific Adenine Dna Glycosylase Isoform Alpha-3, Muty Homolog, Hmyh;
Ec: 3.2.2.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mutyh
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040906-16
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.2.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (799 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1X51
  • Original NMR restraints for 1X51 from PDB
  • Retrieve 1X51 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X51 from S2C, [Save to disk]
  • View 1X51 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X51
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X51, from MSDmotif at EBI
  • Fold representative 1x51 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x51_A] [1x51]
  • SWISS-PROT database: [Q9UIF7]
  • Domain organization of [MUTYH_HUMAN] by SWISSPFAM
  • Other resources with information on 1X51
  • Community annotation for 1X51 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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