1X5Q Cell Adhesion, Cell Cycle date May 16, 2005
title Solution Structure Of The First Pdz Domain Of Scribble Homolog Protein (Hscrib)
authors X.R.Qin, T.Nagashima, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Lap4 Protein
Chain: A
Fragment: Pdz Domain
Synonym: Scribble Homolog Protein, Hscrib
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Scrib, Crib1, Kiaa0147, Lap4, Scrb1, Vartul
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040628-05
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (526 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1X5Q
  • Original NMR restraints for 1X5Q from PDB
  • Retrieve 1X5Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X5Q from S2C, [Save to disk]
  • View 1X5Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X5Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X5Q, from MSDmotif at EBI
  • Fold representative 1x5q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x5q_A] [1x5q]
  • SWISS-PROT database: [Q14160]
  • Domain organization of [SCRIB_HUMAN] by SWISSPFAM
  • Domain found in 1X5Q: [PDZ ] by SMART
  • Other resources with information on 1X5Q
  • Community annotation for 1X5Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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