1X63 Contractile Protein date May 17, 2005
title Solution Structure Of The Second Lim Domain Of Skeletal Muscle Lim Protein 1
authors X.R.Qin, T.Nagashima, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Skeletal Muscle Lim-Protein 1
Chain: A
Fragment: Lim Domain
Synonym: Slim 1, Slim, Four And A Half Lim Domains Protein 1, Fhl-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fhl1, Slim1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040816-09
Other_details: Cell Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
note 1X63 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (393 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 1X63
  • CSU: Contacts of Structural Units for 1X63
  • Original NMR restraints for 1X63 from PDB
  • Retrieve 1X63 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X63 from S2C, [Save to disk]
  • View 1X63 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X63
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X63, from MSDmotif at EBI
  • Fold representative 1x63 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x63] [1x63_A]
  • SWISS-PROT database: [Q13642]
  • Domain organization of [FHL1_HUMAN] by SWISSPFAM
  • Domain found in 1X63: [LIM ] by SMART
  • Other resources with information on 1X63
  • Community annotation for 1X63 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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