1X6B Signaling Protein date May 17, 2005
title Solution Structures Of The Sh3 Domain Of Human Rho Guanine E Factor (Gef) 16
authors M.Sato, K.Saito, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken S Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Rho Guanine Exchange Factor (Gef) 16
Chain: A
Fragment: Sh3 Domain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arhgef16
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040816-12
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (393 Kb) [Save to disk]
  • Biological Unit Coordinates (1x6b.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 1X6B
  • Original NMR restraints for 1X6B from PDB
  • Retrieve 1X6B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X6B from S2C, [Save to disk]
    • View 1X6B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1X6B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1X6B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x6b_A] [1x6b]
  • SWISS-PROT database: [Q5VV41]
  • Domain organization of [ARHGG_HUMAN] by SWISSPFAM
  • Domain found in 1X6B: [SH3 ] by SMART
    • Other resources with information on 1X6B
  • Community annotation for 1X6B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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