1X6F Dna Binding Protein date May 17, 2005
title Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 462
authors M.Sato, K.Saito, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Zinc Finger Protein 462
Chain: A
Fragment: C2h2 Type Zinc Finger Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Znf462
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P041012-05
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (466 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 1X6F
  • CSU: Contacts of Structural Units for 1X6F
  • Original NMR restraints for 1X6F from PDB
  • Retrieve 1X6F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X6F from S2C, [Save to disk]
  • View 1X6F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X6F
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1X6F, from MSDmotif at EBI
  • Fold representative 1x6f from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x6f_A] [1x6f]
  • SWISS-PROT database: [Q96JM2]
  • Domain organization of [ZN462_HUMAN] by SWISSPFAM
  • Domain found in 1X6F: [ZnF_C2H2 ] by SMART
  • Other resources with information on 1X6F
  • Community annotation for 1X6F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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