1XAW Cell Adhesion date Aug 26, 2004
title Crystal Structure Of The Cytoplasmic Distal C-Terminal Domai Occludin
authors Y.Li, A.S.Fanning, J.M.Anderson, A.Lavie
compound source
Molecule: Occludin
Chain: A
Fragment: Residues 383-522
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ocln
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.261 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.960 109.570 48.130 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.45 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the Conserved Cytoplasmic C-terminal Domain of Occludin: Identification of the ZO-1 Binding Surface., Li Y, Fanning AS, Anderson JM, Lavie A, J Mol Biol 2005 Sep 9;352(1):151-64. PMID:16081103
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (1xaw.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1XAW
  • Likely Quarternary Molecular Structure file(s) for 1XAW
  • Structure Factors (167 Kb)
  • Retrieve 1XAW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XAW from S2C, [Save to disk]
  • Re-refined 1xaw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XAW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XAW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XAW, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xaw_A] [1xaw]
  • SWISS-PROT database: [Q16625]
  • Belongs to the occludin (occludin) family according to TCDB.
  • Domain organization of [OCLN_HUMAN] by SWISSPFAM
    • Other resources with information on 1XAW
  • Community annotation for 1XAW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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