1XC1	Metal Transport	date	Aug 31, 2004
title	Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp
authors	W.Zhong, D.Alexeev, I.Harvey, M.Guo, D.J.B.Hunter, H.Zhu, D.J.Camp P.J.Sadler
compound		source
Molecule: Periplasmic Iron-Binding Protein Chain: A, B, C, D, E, F, G, H, I Synonym: Ferric Binding Protein, Iron Transporter Protein Engineered: Yes		Organism_scientific: Neisseria Gonorrhoeae Organism_taxid: 485 Gene: Fbpa Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Top10 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ptrc99a-Fbp-Ng
symmetry	Space Group: P 32	R_factor 0.191 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 146.200 146.200 113.558 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.51 Å
ligand	ZRC	enzyme
related structures	by homologous chain: 1MRP, 1NNF
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, I, G
Primary reference	Assembly of an oxo-zirconium(IV) cluster in a protein cleft., Zhong W, Alexeev D, Harvey I, Guo M, Hunter DJ, Zhu H, Campopiano DJ, Sadler PJ, Angew Chem Int Ed Engl 2004 Nov 12;43(44):5914-8. PMID:15472987

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (449 Kb) [Save to disk] Biological Unit Coordinates (1xc1.pdb1.gz) 56 Kb Biological Unit Coordinates (1xc1.pdb2.gz) 55 Kb Biological Unit Coordinates (1xc1.pdb3.gz) 55 Kb Biological Unit Coordinates (1xc1.pdb4.gz) 55 Kb Biological Unit Coordinates (1xc1.pdb5.gz) 55 Kb Biological Unit Coordinates (1xc1.pdb6.gz) 55 Kb Biological Unit Coordinates (1xc1.pdb7.gz) 54 Kb Biological Unit Coordinates (1xc1.pdb8.gz) 55 Kb Biological Unit Coordinates (1xc1.pdb9.gz) 55 Kb LPC: Ligand-Protein Contacts for 1XC1 CSU: Contacts of Structural Units for 1XC1 Likely Quarternary Molecular Structure file(s) for 1XC1 Retrieve 1XC1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XC1 from S2C, [Save to disk]

View 1XC1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1XC1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1XC1, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1xc1a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1xc1b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1xc1c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1f1xc1, region C:4-147 [Jmol] [rasmolscript] [script source]     - Domain d1xc1d_, region D [Jmol] [rasmolscript] [script source]     - Domain d1xc1e_, region E [Jmol] [rasmolscript] [script source]     - Domain d1xc1f_, region F [Jmol] [rasmolscript] [script source]     - Domain d1xc1g_, region G [Jmol] [rasmolscript] [script source]     - Domain d1xc1h_, region H [Jmol] [rasmolscript] [script source]     - Domain d1xc1i_, region I [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xc1] [1xc1_F] [1xc1_A] [1xc1_C] [1xc1_E] [1xc1_G] [1xc1_H] [1xc1_I] [1xc1_B] [1xc1_D] SWISS-PROT database: [P17259] Domain organization of [FBP_NEIGO] by SWISSPFAM

Other resources with information on 1XC1

Community annotation for 1XC1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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