1XD5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
related structures by homologous chain: 1XD6
Primary referenceStructural Mechanism Governing the Quaternary Organization of Monocot Mannose-binding Lectin Revealed by the Novel Monomeric Structure of an Orchid Lectin., Liu W, Yang N, Ding J, Huang RH, Hu Z, Wang DC, J Biol Chem 2005 Apr 15;280(15):14865-76. Epub 2005 Jan 13. PMID:15649901
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (1xd5.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (1xd5.pdb2.gz) 20 Kb
  • Biological Unit Coordinates (1xd5.pdb3.gz) 19 Kb
  • Biological Unit Coordinates (1xd5.pdb4.gz) 19 Kb
  • Biological Unit Coordinates (1xd5.pdb5.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1XD5
  • CSU: Contacts of Structural Units for 1XD5
  • Likely Quarternary Molecular Structure file(s) for 1XD5
  • Structure Factors (228 Kb)
  • Retrieve 1XD5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XD5 from S2C, [Save to disk]
  • Re-refined 1xd5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XD5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xd5] [1xd5_A] [1xd5_B] [1xd5_C] [1xd5_D]
  • SWISS-PROT database: [Q9AXZ2]
  • Domain found in 1XD5: [B_lectin ] by SMART

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