1XDY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MTE, W enzyme
related structures by homologous chain: 1XDQ
Gene
Ontology
ChainFunctionProcessComponent
J, B, D, H, F, G, I, C, A, E


Primary referenceStructural and biochemical identification of a novel bacterial oxidoreductase., Loschi L, Brokx SJ, Hills TL, Zhang G, Bertero MG, Lovering AL, Weiner JH, Strynadka NC, J Biol Chem 2004 Nov 26;279(48):50391-400. Epub 2004 Sep 07. PMID:15355966
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (437 Kb) [Save to disk]
  • Biological Unit Coordinates (1xdy.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (1xdy.pdb2.gz) 50 Kb
  • Biological Unit Coordinates (1xdy.pdb3.gz) 50 Kb
  • Biological Unit Coordinates (1xdy.pdb4.gz) 50 Kb
  • Biological Unit Coordinates (1xdy.pdb5.gz) 49 Kb
  • Biological Unit Coordinates (1xdy.pdb6.gz) 49 Kb
  • Biological Unit Coordinates (1xdy.pdb7.gz) 50 Kb
  • Biological Unit Coordinates (1xdy.pdb8.gz) 50 Kb
  • Biological Unit Coordinates (1xdy.pdb9.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 1XDY
  • CSU: Contacts of Structural Units for 1XDY
  • Likely Quarternary Molecular Structure file(s) for 1XDY
  • Structure Factors (1241 Kb)
  • Retrieve 1XDY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XDY from S2C, [Save to disk]
  • Re-refined 1xdy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XDY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xdy_J] [1xdy] [1xdy_A] [1xdy_B] [1xdy_C] [1xdy_D] [1xdy_E] [1xdy_F] [1xdy_G] [1xdy_H] [1xdy_I]
  • SWISS-PROT database: [P76342]

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