1XFT Hydrolase date Sep 15, 2004
title Synchrotron X-Ray Powder Diffraction Study Of Hexagonal Turk White Lysozyme
authors I.Margiolaki, J.P.Wright
compound source
Molecule: Lysozyme C
Chain: A
Fragment: Lysozyme
Synonym: 1,4-Beta-N-Acetylmuramidase C
Ec: 3.2.1.17
Organism_scientific: Meleagris Gallopavo
Organism_common: Turkey
Organism_taxid: 9103
Tissue: Egg White
Other_details: Sigma-Aldrich Chemical Company Lot. 064h7230
symmetry Space Group: P 61 2 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.086 71.086 85.028 90.00 90.00 120.00
method Powder Diffractionresolution
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSynchrotron X-ray powder diffraction study of hexagonal turkey egg-white lysozyme., Margiolaki I, Wright JP, Fitch AN, Fox GC, Von Dreele RB, Acta Crystallogr D Biol Crystallogr. 2005 Apr;61(Pt 4):423-32. Epub 2005, Mar 24. PMID:15805597
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1xft.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1XFT
  • Likely Quarternary Molecular Structure file(s) for 1XFT
  • Structure Factors (30 Kb)
  • Retrieve 1XFT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XFT from S2C, [Save to disk]
  • View 1XFT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XFT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XFT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xft_A] [1xft]
  • SWISS-PROT database: [P00703]
  • Domain organization of [LYSC_MELGA] by SWISSPFAM
  • Domain found in 1XFT: [LYZ1 ] by SMART
  • Other resources with information on 1XFT
  • Community annotation for 1XFT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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