1XMJ	Membrane Protein, Hydrolase	date	Oct 02, 2004
title	Crystal Structure Of Human Deltaf508 Human Nbd1 Domain With
authors	H.A.Lewis, X.Zhao, C.Wang, J.M.Sauder, I.Rooney, B.W.Noland, D.Lor M.C.Kearins, K.Conners, B.Condon, P.C.Maloney, W.B.Guggino, J.F. S.Emtage, Structural Genomix
compound		source
Molecule: Cystic Fibrosis Transmembrane Conductance Regulat Chain: A Fragment: Nucleotide Binding Domain One Synonym: Cftr; Camp- Dependent Chloride Channel Ec: 3.6.3.49 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cftr Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
symmetry	Space Group: P 43 21 2	R_factor 0.220 R_Free 0.287
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.793 59.793 144.398 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	ATP, MG	enzyme	Hydrolase E.C.3.6.3.49 BRENDA
related structures	by homologous chain: 1R0Z, 1XMI
Gene Ontology	Chain Function Process Component A
Primary reference	Impact of the {Delta}F508 Mutation in First Nucleotide-binding Domain of Human Cystic Fibrosis Transmembrane Conductance Regulator on Domain Folding and Structure., Lewis HA, Zhao X, Wang C, Sauder JM, Rooney I, Noland BW, Lorimer D, Kearins MC, Conners K, Condon B, Maloney PC, Guggino WB, Hunt JF, Emtage S, J Biol Chem 2005 Jan 14;280(2):1346-53. Epub 2004 Nov 03. PMID:15528182

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (1xmj.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 1XMJ CSU: Contacts of Structural Units for 1XMJ Likely Quarternary Molecular Structure file(s) for 1XMJ Structure Factors (110 Kb) Retrieve 1XMJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1XMJ from S2C, [Save to disk] Re-refined 1xmj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1XMJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1XMJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1XMJ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1xmja_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1xmj_A] [1xmj] SWISS-PROT database: [P13569] Belongs to the atp-binding cassette (abc) superfamily according to TCDB. Domain organization of [CFTR_HUMAN] by SWISSPFAM Domain found in 1XMJ: [AAA ] by SMART

Other resources with information on 1XMJ

Community annotation for 1XMJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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