| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (41 Kb) [Save to disk]
 - CSU: Contacts of Structural Units for 1XQ8
- Original NMR restraints
for 1XQ8 from PDB
- Retrieve 1XQ8 in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1XQ8
from S2C,
[Save to disk]
|
| View 1XQ8 in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
- On AstexViewer, from
MSD-EBI
(viewer documentation).
- On RasMol
(Install RasMol freeware)
Here's help on
how to use RasMol.
|
| Visual 3D analysis of 1XQ8 |
- Cartoon
representation from PDB Cartoon
- Ramachandran
plot from PDBSum
|
| Structure-derived information |
- Dipole moment, from Dipole Server at Weizmann Institute
- Crystal Contacts, from CryCo at Weizmann Institute
- 3D motif for 1XQ8,
from MSDmotif at EBI
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1xq8a_, region A
[Jmol]
[rasmolscript]
[script source]
- Fold representative 1xq8 from FSSP and Dali (Families of Structurally Similar Proteins)
|
| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1xq8_A]
- SWISS-PROT database: [P37840]
- Belongs to the synuclein (synuclein) family
according to TCDB. - Domain organization of [SYUA_HUMAN] by SWISSPFAM
- Alignments of the sequence of 1XQ8 with the sequences
similar proteins can be viewed for 1XQ8's classification [SYUA_HUMAN] at ProtoMap.
Click on "Neighbors List", then on the "See Alignments" button below the list.
- A sequence distance tree ("phylogenetic tree")
can be viewed for 1ACL's classification [SYUA_HUMAN] at ProtoMap. Click on the Cluster number.
|
|
Other resources with information on 1XQ8 |
- Community annotation for 1XQ8 at PDBWiki (http://pdbwiki.org)
- MMDB (Entrez's Structure Database)
|
| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
|
|
Membrane localization by OPM: Eukaryotic plasma membrane
