1XT6 Electron Transport date Oct 21, 2004
title S35c Flavodoxin Mutant In The Semiquinone State
authors R.Artali, N.Marchini, F.Meneghetti, D.Cavazzini, A.Cassetta, C.Sa G.Bombieri, G.L.Rossi, G.Gilardi
compound source
Molecule: Flavodoxin
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Desulfovibrio Vulgaris Subsp. Vulgaris
Organism_taxid: 882
Strain: Hildenborough
Atcc: 2957
Expression_system: Desulfovibrio Vulgaris
Expression_system_taxid: 881
symmetry Space Group: P 43 21 2
R_factor 0.192 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.080 51.080 138.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand FMN enzyme
related structures by homologous chain: 1AKT, 1BU5
Gene
Ontology
ChainFunctionProcessComponent
A
  • electron transfer activity


    • Primary referenceStructure of S35C flavodoxin mutant from Desulfovibrio vulgaris in the semiquinone state., Artali R, Marchini N, Meneghetti F, Cavazzini D, Cassetta A, Sassone C, Acta Crystallogr D Biol Crystallogr. 2005 Apr;61(Pt 4):481-4. Epub 2005, Mar 24. PMID:15805604
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1xt6.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 1XT6
  • CSU: Contacts of Structural Units for 1XT6
  • Likely Quarternary Molecular Structure file(s) for 1XT6
  • Structure Factors (272 Kb)
  • Retrieve 1XT6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XT6 from S2C, [Save to disk]
  • Re-refined 1xt6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XT6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XT6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XT6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xt6a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xt6_A] [1xt6]
  • SWISS-PROT database: [P00323]
  • Domain organization of [FLAV_DESVH] by SWISSPFAM
    • Other resources with information on 1XT6
  • Community annotation for 1XT6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science