1XUT Cytokine Receptor date Oct 26, 2004
title Solution Structure Of Taci-Crd2
authors S.G.Hymowitz, D.R.Patel, H.J.Wallweber, S.Runyon, M.Yan, J.Yin, S.K.Shriver, N.C.Gordon, B.Pan, N.J.Skelton, R.F.Kelley, M.A.Starovasnik
compound source
Molecule: Tumor Necrosis Factor Receptor Superfamily Member 13b;
Chain: A
Fragment: Taci_d2
Synonym: Transmembrane Activator And Caml Interactor, Tnfrsf13b;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnfrsf13b, Taci
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
methodSolution NMR
related structures by homologous chain: 1XU1
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding., Hymowitz SG, Patel DR, Wallweber HJ, Runyon S, Yan M, Yin J, Shriver SK, Gordon NC, Pan B, Skelton NJ, Kelley RF, Starovasnik MA, J Biol Chem 2004 Nov 12;. PMID:15542592
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1XUT
  • Original NMR restraints for 1XUT from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1XUT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XUT from S2C, [Save to disk]
  • View 1XUT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XUT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1XUT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xuta_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1xut from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xut_A] [1xut]
  • SWISS-PROT database: [O14836]
  • Domain organization of [TR13B_HUMAN] by SWISSPFAM
  • Other resources with information on 1XUT
  • Community annotation for 1XUT at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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