1XZ1 Metal Binding Protein date Nov 11, 2004
title Complex Of Halothane With Apoferritin
authors R.Liu, P.J.Loll, R.G.Eckenhoff
compound source
Molecule: Ferritin Light Chain
Chain: A
Synonym: Ferritin L Subunit
Organism_scientific: Equus Caballus
Organism_common: Horse
Organism_taxid: 9796
Organ: Spleen
symmetry Space Group: F 4 3 2
R_factor 0.179 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
181.610 181.610 181.610 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand CD, HLT enzyme
related structures by homologous chain: 1AEW, 1BG7, 1XZ3
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein., Liu R, Loll PJ, Eckenhoff RG, FASEB J 2005 Apr;19(6):567-76. PMID:15791007
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1xz1.pdb1.gz) 763 Kb
  • LPC: Ligand-Protein Contacts for 1XZ1
  • CSU: Contacts of Structural Units for 1XZ1
  • Likely Quarternary Molecular Structure file(s) for 1XZ1
  • Structure Factors (302 Kb)
  • Retrieve 1XZ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XZ1 from S2C, [Save to disk]
  • Re-refined 1xz1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XZ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XZ1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1XZ1, from MSDmotif at EBI
  • Fold representative 1xz1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xz1_A] [1xz1]
  • SWISS-PROT database: [P02791]
  • Domain organization of [FRIL_HORSE] by SWISSPFAM
  • Other resources with information on 1XZ1
  • Community annotation for 1XZ1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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