1Y1V		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, ZN	enzyme
Gene Ontology	Chain Function Process Component A RNA-directed 5'-3' RNA polym... B RNA-directed 5'-3' RNA polym... C RNA-directed 5'-3' RNA polym... D RNA-directed 5'-3' RNA polym... E RNA-directed 5'-3' RNA polym... F RNA-directed 5'-3' RNA polym... G RNA-directed 5'-3' RNA polym... H RNA-directed 5'-3' RNA polym... I RNA-directed 5'-3' RNA polym... J RNA-directed 5'-3' RNA polym... DNA-directed RNA polymerase ... K RNA-directed 5'-3' RNA polym... L RNA-directed 5'-3' RNA polym... S
Primary reference	Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS., Kettenberger H, Armache KJ, Cramer P, Mol Cell. 2004 Dec 22;16(6):955-65. PMID:15610738

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (650 Kb) [Save to disk] Biological Unit Coordinates (1y1v.pdb1.gz) 640 Kb LPC: Ligand-Protein Contacts for 1Y1V CSU: Contacts of Structural Units for 1Y1V Likely Quarternary Molecular Structure file(s) for 1Y1V Structure Factors (1132 Kb) Retrieve 1Y1V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Y1V from S2C, [Save to disk] Re-refined 1y1v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Y1V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1y1v_L] [1y1v_S] [1y1v] [1y1v_A] [1y1v_B] [1y1v_C] [1y1v_D] [1y1v_E] [1y1v_F] [1y1v_G] [1y1v_H] [1y1v_I] [1y1v_J] [1y1v_K] SWISS-PROT database: [P20434] [P20435] [P20436] [P40422] [P22139] [P38902] [P04050] [P08518] [P16370] [P20433] [P34087] [P27999] [P07273] Domains found in 1Y1V: [RNA_pol_Rpb6] [RPOL4c] [RPOL8c] [RPOL9] [RPOLA_N] [RPOLCX] [RPOLD] [S1] [TFS2M] [ZnF_C2C2 ] by SMART

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