1Y3V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, UIR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA simple protocol to estimate differences in protein binding affinity for enantiomers without prior resolution of racemates., Fokkens J, Klebe G, Angew Chem Int Ed Engl. 2006 Jan 30;45(6):985-9. PMID:16374786
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1y3v.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 1Y3V
  • CSU: Contacts of Structural Units for 1Y3V
  • Likely Quarternary Molecular Structure file(s) for 1Y3V
  • Structure Factors (294 Kb)
  • Retrieve 1Y3V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Y3V from S2C, [Save to disk]
  • Re-refined 1y3v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Y3V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1y3v] [1y3v_A]
  • SWISS-PROT database: [P00760]
  • Domain found in 1Y3V: [Tryp_SPc ] by SMART

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