1Y5P Toxin Signaling Protein date Dec 02, 2004
title Predicted Structure Of An Alpha Short Chain Neurotoxin From Cobra Naja Naja Bound With Acetylcholine Receptor Peptide
authors A.Bano, A.Salim, A.Abbasi, Z.H.Zaidi
compound source
Molecule: Weak Neurotoxin 8
Chain: A
Synonym: Alpha Neurotoxin
Organism_scientific: Naja Naja
Organism_common: Indian Cobra

Molecule: 6-Mer Peptide From Acetylcholine Receptor Protein, Alpha Chain;
Chain: B

Organism_scientific: Homo Sapiens
Organism_common: Human
methodTheoretical Model
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1Y5P
  • View 1Y5P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Y5P
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 1y5p from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • SWISS-PROT database: [P02708] [P29182]
  • Belongs to the neurotransmitter receptor, cys loop, ligand-gated ion channel (lic) family according to TCDB.
  • Domain organization of [ACHA_HUMAN] [TXW8_NAJNA] by SWISSPFAM
  • Other resources with information on 1Y5P
  • Community annotation for 1Y5P at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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