1YB9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 2OT, SPM enzyme
Primary referenceProbing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications(,)., Egli M, Minasov G, Tereshko V, Pallan PS, Teplova M, Inamati GB, Lesnik EA, Owens SR, Ross BS, Prakash TP, Manoharan M, Biochemistry 2005 Jun 28;44(25):9045-9057. PMID:15966728
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (1yb9.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 1YB9
  • CSU: Contacts of Structural Units for 1YB9
  • Likely Quarternary Molecular Structure file(s) for 1YB9
  • Structure Factors (51 Kb)
  • Retrieve 1YB9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YB9 from S2C, [Save to disk]
  • Re-refined 1yb9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YB9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yb9] [1yb9_A] [1yb9_B]
  • SWISS-PROT database:

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