1YBI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceThe Structure of the Neurotoxin-associated Protein HA33/A from Clostridium botulinum Suggests a Reoccurring beta-Trefoil Fold in the Progenitor Toxin Complex., Arndt JW, Gu J, Jaroszewski L, Schwarzenbacher R, Hanson MA, Lebeda FJ, Stevens RC, J Mol Biol 2005 Mar 4;346(4):1083-93. Epub 2005 Jan 20. PMID:15701519
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (1ybi.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (1ybi.pdb2.gz) 54 Kb
  • CSU: Contacts of Structural Units for 1YBI
  • Likely Quarternary Molecular Structure file(s) for 1YBI
  • Structure Factors (1138 Kb)
  • Retrieve 1YBI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YBI from S2C, [Save to disk]
  • Re-refined 1ybi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YBI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ybi] [1ybi_A] [1ybi_B]
  • SWISS-PROT database: [Q45871]
  • Domain found in 1YBI: [RICIN ] by SMART

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